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Bernhard Blümich
Essential NMR For Scientists and Engineers Second Edition
Essential NMR
Bernhard Blümich
Essential NMR For Scientists and Engineers Second Edition
123
Bernhard Blümich Institut für Technische und Makromolekulare Chemie RWTH Aachen University Aachen, Germany
ISBN 9783030107031 ISBN 9783030107048 https://doi.org/10.1007/9783030107048
(eBook)
Library of Congress Control Number: 2019931515 1st edition: © SpringerVerlag Berlin Heidelberg 2005 2nd edition: © Springer Nature Switzerland AG 2019 This work is subject to copyright. All rights are reserved by the Publisher, whether the whole or part of the material is concerned, speciﬁcally the rights of translation, reprinting, reuse of illustrations, recitation, broadcasting, reproduction on microﬁlms or in any other physical way, and transmission or information storage and retrieval, electronic adaptation, computer software, or by similar or dissimilar methodology now known or hereafter developed. The use of general descriptive names, registered names, trademarks, service marks, etc. in this publication does not imply, even in the absence of a speciﬁc statement, that such names are exempt from the relevant protective laws and regulations and therefore free for general use. The publisher, the authors and the editors are safe to assume that the advice and information in this book are believed to be true and accurate at the date of publication. Neither the publisher nor the authors or the editors give a warranty, express or implied, with respect to the material contained herein or for any errors or omissions that may have been made. The publisher remains neutral with regard to jurisdictional claims in published maps and institutional afﬁliations. This Springer imprint is published by the registered company Springer Nature Switzerland AG The registered company address is: Gewerbestrasse 11, 6330 Cham, Switzerland
Preface to the Second, Revised Edition
NMR is unique in many ways. Among the diverse analytical techniques it is one of the most lively ones despite being 70 years of age. Technological progress and serendipitous discoveries are the main drivers. More than a decade has passed since the ﬁrst edition of this book was completed. During this time the focus on the essentials of NMR has shifted. In particular, the interest in solidstate NMR imaging has faded, while one and twodimensional Laplace NMR have been established as viable tools to characterize soft matter and porous media. Hyperpolarization techniques ﬁnd increasing attention for enhancing the weak thermodynamic nuclear polarization. Lastly, the commercially available NMR instruments have diversiﬁed. Today, compact instruments are on the market that are suitable not only for materials testing by relaxation and diffusion measurements but also for chemical analysis by highresolution spectroscopy. Although their magnetic ﬁelds are as low as those of the early NMR spectrometers, their analytical power is much better, because they provide nearly the same methodology as today’s highﬁeld instruments. They can be used on the chemical workbench during synthesis or as sensors for controlling chemical and technological processes. A forerunner of this technology are welllogging tools, which are mobile instruments in frequent use for characterizing the fluids and rock formations of the walls from oil wells. All of these facets of NMR are now treated in the extensively revised 2nd edition of ‘Essential NMR’. I am grateful to Gerlind Breuer and Kawarpal Singh for invaluable help with proofreading an editing. Aachen, Germany September 2018
Bernhard Blümich
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Preface to the First Edition
NMR means Nuclear Magnetic Resonance. It is a phenomenon in physics, which has been exploited for more than 50 years in a manifold of different forms with numerous applications in chemical analysis, medical diagnostics, biomedical research, materials characterization, chemical engineering, and well logging. Although the phenomenon is comparatively simple, the different realizations of NMR in terms of methods to gather molecular information steadily increase following the advances in electronics and data processing. A scientist or engineer who wants to gain ﬁrst insight into the basic principles and applications of NMR is faced with the problem of ﬁnding a comprehensive and sufﬁciently short presentation of the essentials of NMR. This is what this book is meant to be. Preferably it is used to accompany a course or to review the material. The ﬁgures and the text are arranged in pairs guiding the reader through the different aspects of NMR. Following the introduction, the principles of the NMR phenomenon are covered in Chapter 2. Chapter 3 on spectroscopy addresses the scientist’s quest for learning about molecular structure, order, and dynamics. Chapters 4 and 5 deal with imaging and lowﬁeld NMR. They are more of interest to the engineer concerned with imaging, transport phenomena, and quality control. It is hoped, that this comprehensive presentation of NMR essentials is a helpful source of information to students and professionals in the applied sciences and in engineering. Aachen, Germany May 2004
Bernhard Blümich
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Suggested Readings
For selective studies, the following combinations of chapters are recommended: Topic of interest NMR spectroscopy NMR imaging NMR for quality control NMR physics
Chapters 1,2,3 1,2,4 1,2,5 1,2,6
Readers Chemists, physicists, biologists Materials scientists, engineers Materials scientists, engineers Physicists, methodologists
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Contents
1 Introduction ........................................................................................................
1
2 Basic Principles ..................................................................................................
9
3 Spectroscopy .......................................................................................................
35
4 Imaging and Transport .....................................................................................
73
5 Relaxometry and Laplace NMR ....................................................................... 111 6 Hyperpolarization ............................................................................................... 143 Index........................................................................................................................................... 159
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1. Introduction Uses of NMR Definition Equipment History Literature
© Springer Nature Switzerland AG 2019 B. Blümich, Essential NMR, https://doi.org/10.1007/9783030107048_1
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1. Introduction
NMR: Nuclear Magnetic Resonance
NMR is a physical resonance phenomenon utilized to investigate molecular properties of matter by irradiating atomic nuclei in magnetic fields with radio waves
Uses of NMR Chemical analysis: Molecular structures and dynamics Medical diagnostics: Magnetic resonance imaging of soft matter Chemical engineering: Quantification of flow and diffusion, reaction monitoring Materials science: Characterization of soft matter and porous materials Geophysical well logging: Analysis of pore networks and fluid typing for oil exploration
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Magnetic Field Homogeneity and Information Resonance condition: ω0 = 2π ν0 = γ B Homogeneous field
B: magnetic field strength ω0 = 2π ν0: resonance frequency γ: gyromagnetic ratio
Linear field
i
NMR spectroscopy
/ia
Inomogeneous field
/iia
NMR tomography
i
i /ia
NMR relaxometry
Types of Information Accessible by NMR The most important relationship in NMR states that the resonance frequency ω is proportional to the strength B of the magnetic field Depending on the degree of homogeneity of the applied magnetic field over the extension of the sample, different information can be retrieved by NMR measurements If the applied field varies less across the sample than the magnetic fields caused by the electrons surrounding the nuclei, the field is said to be homogeneous. Then NMR spectra can be measured with narrow lines from molecules in solution, which reveal the chemical structure of the molecules. This type of NMR is called NMR spectroscopy If the applied field varies linearly across the sample, then so does the resonance frequency, and the NMR spectrum is a projection of the distribution of nuclei in the sample along the gradient direction. This is the basis of magnetic resonance imaging (MRI) or NMR tomography to image objects If the applied field varies arbitrarily across the sample, the nuclei in each volume element resonate at a different frequency, and a broad unstructured distribution of resonance frequencies is observed. In such inhomogeneous magnetic fields, NMR relaxation times can be measured, which scale with the physical properties of the samples. They are affected by the molecular mobility such as the elasticity of polymers and the viscosity of liquids. This type of NMR is called NMR relaxometry
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1. Introduction
NMR Hardware Tabletop NMR spectrometer for chemical analysis NMR logging tool (strayfield relaxometer) for oilwell inspection
Highfield NMR spectrometer for chemical analysis
NMR tomograph for medical diagnostics
Strayfield NMR relaxometer (NMRMOUSE) for nondestructive testing
Equipment Spectroscopy for chemical analysis: NMR spectrometer consisting of a magnet with a highly homogeneous field, a radiofrequency transmitter, a receiver, and a computer Tomography / imaging: NMR tomograph consisting of a magnet with a homogeneous field, a modulator for magnetic gradient fields, a radiofrequency transmitter, a receiver, and a computer Relaxometry for materials testing: NMR relaxometer consisting of a magnet without particular requirements to field homogeneity, preferably a modulator for magnetic gradient fields, a radiofrequency transmitter, a receiver, and a computer. NMR relaxometers are typically tabletop instruments with permanent magnets Unilateral NMR: Strayfield NMR relaxometer like the NMRMOUSE® suitable for nondestructive testing of large objects NMR logging: NMR relaxometer incl. strayfield magnet in a tube, shock resistant, and temperature resistant up to 170° C for insertion into a ground hole
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Some Nobel Prizes for NMR
Kurt Wüthrich, 1938. Nobel Prize in Chemistry 2002
Felix Bloch, 1905  1983. Nobel Prize in Physics 1952
ENC Boston 1995
ENC 1995, Boston
Sir Peter Mansfield, 19332017. Nobel Prize in Medicine or Physiology 2003
Richard R. Ernst, 1933. Nobel Prize in Chemistry 1991
Edward Mills Purcell, 1912  1997. Nobel Prize in Physics 1952
From Wikimedia: Wüthrich, Bloch: CC BYSA 3.0; Mansfield: license GFDL 1.2, Lauterbur: public domain
Paul Lauterbur, 19292007. Nobel Prize in Medicine or Physiology 2003
History of NMR 1945: First successful detection of an NMR signal by Felix Bloch (Stanford) and Edward Purcell (Harvard): Nobel Prize in Physics 1952 1949: Discovery of the NMR echo by Erwin Hahn 1950: Indirect spinspin coupling by W. G. Proctor and F. C. Yu 1951: Chemical shift by J. T. Arnold, S.S. Dharmatti, and M.E. Packard 1966: Fourier NMR by Richard Ernst, Nobel Prize in Chemistry 1991 1971: Twodimensional NMR by Jean Jeener, later by Richard Ernst 1972: Proton enhanced highresolution spectroscopy of dilute spins in solids through crosspolarization by Alexander Pines, M.G. Gibby, J.S. Waugh 1973: NMR imaging by Paul Lauterbur and Peter Mansfield, Nobel Prize in Medicine or Physiology 2003 1977: Highresolution 13C solidstate NMR spectroscopy with cross polarization and magic angle spinning by J.S. Waugh, E.O. Stejskal, and J. Schaefer 1979: 2D Exchange NMR by J. Jeener. Application to protein analysis in molecular Biology by Kurt Wüthrich, Nobel Prize in Chemistry 2002 1980: Unilateral NMR in process control and medicine by Jasper Jackson 1984: Hyperpolarization of xenon by William Happer 1995: Commercialization of well logging NMR 2005: Longlived spin states by Malcolm Levitt 2009: Contact hyperpolarization with parahydrogen by Simon Duckett 2010: Tabletop NMR spectroscopy
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1. Introduction
Recommended Reading: General B. Blümich, A. HaberPohlmeier, W. Zia, Compact NMR, de Gruyter, Berlin, 2014 J. Keeler, Understanding NMR Spectroscopy, 2nd ed., Wiley, Chichester, 2010 M. Levitt, Spin Dynamics, 2nd ed., Wiley, Chichester, 2008 C.P. Slichter, Principles of Magnetic Resonance, 3rd ed., Springer, Berlin, 1996 R.R. Ernst, G. Bodenhausen, A. Wokaun, Principles of Nuclear Magnetic Resonance in One and Two Dimensions, Clarendon Press, Oxford, 1987 E. Fukushima, S.B.W. Roeder, Experimental Pulse NMR: A Nuts and Bolts Approach, Westview, Boulder, 1981 A. Abragam, The Principles of Nuclear Magnetism, Clarendon Press, Oxford, 1961
Recommended Reading: Relaxometry M. Johns, E.J. Friedjonson, S. Vogt, A. Haber, eds., Mobile NMR and MRI, Royal Society of Chemistry, Cambridge, 2016 F. Casanova, J. Perlo, B. Blümich, eds., SingleSided NMR, Springer, Berlin, 2011 J. Kowalewski, L. Mäler, Nuclear Spin Relaxation in Liquids: Theory, Experiments, and Applications, Taylor & Francis, London, 2006 V.I. Bakhmutov, Practical NMR Relaxation for Chemists, Wiley, Chichester, 2004 G.R. Coates, L. Xiao, M.G. Prammer, NMR Logging: Principles and Applications, Halliburton Energy Services, Houston, 1999
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Recommended Reading: Imaging & Transport L. Ciobanu, Microscopic Magnetic Resonance Imaging, Pan Stanford Publishing, Singapore, 2017 R.W. Brown,Y.C.N. Chung, E.M. Haacke, M.R. Thompson, R. Venkatesan, Magnetic Resonance Imaging, Physical Principles and Sequence Design, 2nd edition, Wiley, Hoboken, 2014 E. Hardy, NMR Methods for the Investigation of Structure and Transport, Springer, Berlin, 2012 P.T. Callaghan, Translational Dynamics & Magnetic Resonance, Oxford University Press, Oxford, 2011 W.S. Price, NMR Studies of Translational Motion: Principles and Applications, Cambridge University Press, Cambridge, 2009 B. Blümich, NMR Imaging of Materials, Clarendon Press, Oxford, 2000 R. Kimmich, NMR Tomography, Diffusometry, Relaxometry, Springer, Berlin, 1997 M.T. Vlaardingerbroek, J.A. den Boer, Magnetic Resonance Imaging, Springer, Berlin, 1996 P.T. Callaghan, Principles of Nuclear Magnetic Resonance Microscopy, Clarendon Press, Oxford, 1991
Recommended Reading: Spectroscopy V.I. Bakhmutov, NMR Spectroscopy in Liquids and Solids, Taylor & Francis, Boca Raton, 2015 M. Findeisen, S. Berger, 50 and More Essential NMR Experiments: A Detailed Guide, WileyVCH, Weinheim, 2014 H. Günther, NMR Spectroscopy: Basic Principles, Concepts, and Applications in Chemistry, 3rd edition, WileyVCH, Weinheim, 2013 D. Apperley, R.K. Harris, P. Hodgkinson, SolidState NMR: Basic Principles and Practice, Momentum, New York, 2012 R.K. Harris, R.E. Wasylishen, M.J. Duer, eds., NMR Crystallography, Wiley, Chichester, 2009 M.J. Duer, SolidState NMR Spectroscopy, Blackwell, Oxford, 2004 M.J. Duer, ed., SolidState NMR Spectrocopy, Blackwell, Oxford, 2002 K. SchmidtRohr and H.W. Spiess, Multidimensional SolidState NMR and Polymers, Academic Press, London, 1994
2. Basic Principles NMR spectrum Nuclear magnetism Rotating coordinate frame NMR spectrometer Pulsed NMR Fourier transformation Phase correction Relaxation Spin echo Measurement methods Spatial resolution Fourier and Laplace NMR
© Springer Nature Switzerland AG 2019 B. Blümich, Essential NMR, https://doi.org/10.1007/9783030107048_2
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2. Basic Principles
NMR is a Form of Telecommunication in a Magnetic Field B0
ω0 = γ B 0 resonance frequency ω0 = 2π ν0
Atomic nuclei in a magnetic field B0
NMR spectrometer
Properties of Atomic Nuclei Some magnetic isotopes important to NMR are listed below along with their resonance frequencies ν0 at 1 T field strength, natural abundance, and sensitivity relative to 13C Chemical shift range and reference compound are relevant for chemical analysis by NMR spectroscopy 1H is the most sensitive stable nucleus for NMR and the most abundant nucleus in the universe Nuclear Natural Sensitivity Spin ν0 at isotope abundance rel. to 13C 1.0 T [%] [MHz]
Chemical shift range [ppm]
Reference compound
12 to
−1
SiMe4
12 to −1 240 to −10
SiMe4 SiMe4
1H
99.99
5878
½
42.58
2H 13C
0.01 1.07
0.00652 1.0
1 ½
6.54 10.71
15N
0.36
0.0223
½
30.42 1200 to −500
MeNO2
19F
100.00
4890
½
40.06
100 to −300
CFCl3
29Si
4.69 100.00
2.16 391
½ ½
8.46 17.24
100 to −400 230 to −200
SiMe4 H3PO4
31P
2. Basic Principles
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Electrons in Motion double bond
single bond
C=C
CC Distributions of binding electrons
binding electrons
Moving charges generate a magnetic field Example: coil
Magnetic Shielding The NMR frequency is determined by the magnetic field at the site of the nucleus Atomic nuclei are surrounded by electrons In molecules, the electrons of the chemical bond are shared by different nuclei Electrons of atoms and molecules move in orbitals, which are studied in quantum mechanics The orbitals of the binding electrons are characteristic of the chemical structure of the molecule Electrons carry an electric charge Electric charges in motion generate a magnetic field The internal magnetic field generated by the electrons moving in the external magnetic field B0 is usually opposed to B0. It shields the nucleus from B0
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2. Basic Principles
Frequency Distributions of Radio Waves FM band in Aachen
110
Eins Live R1 Tros (NL)
Radio 5
95 100 frequency [MHz]
Radio Europa RTL (B)
WDR 2
DLF
WDR 3 Radio 21
WDR 4
SWR 3 Limb Z (NL)
Radio 2 (NL)
Radio 3
90
Radio Rur
100
Radio Wallonie (B) SWR 1
90 BRF (B)
amplitude [dBm]
80
RTL Radio 4(NL) Musique 3 (B) Radio Aachen
FM band in Aachen
70
105
13C
NMR spectrum
Chemical structure
Spectra are fingerprints
Geographic position
Chemical Shift The magnetic field generated by the electrons shifts the resonance frequency, ω0 = 2π ν0 = γ (1  σ) B0 The quantity σ is the magnetic shielding for a given chemical group The quantity δ = (ν0  νref) / νref is the chemical shift of a chemical group. It is independent of the strength B0 of the magnetic field The quantity νref is the reference frequency, for example, the resonance frequency of tetramethyl silane (TMS: SiMe4) for 1H and 13C NMR The chemical shift can be calculated from tabulated chemical shift increments as well as ab initio from quantum mechanics Magnetically inequivalent chemical groups possess different chemical shifts In liquids narrow resonance signals are observed with typical widths of 0.1 Hz The distribution of resonance frequencies forms the NMR spectrum The NMR spectrum is an easytoread fingerprint of the molecular structure in a way similar to the distribution of FM radio signals at a given location, which provides a fingerprint of the geographic position NMR spectra of molecules in solution are measured routinely for chemical identification and structural analysis
2. Basic Principles
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Spin and Precession
Arnold Sommerfeld, 1868 – 1951. Heisenberg‘s teacher: Theory of the spinning top (Wikimedia, public domain)
Paul Adrien Maurice Dirac, 1902 – 1984. Nobel prize in Physics 1933: Theory of the spin (Wikimedia, public domain)
Otto Stern 1888 – 1963. Nobel prize in Physics 1943: Experimental proof of the spin (Wikimedia, public domain)
Nuclear Magnetism In an NMR sample of material there are of the order of 1 mole or 6×1023 atomic nuclei 1 mole is 18 g of water. It would take a human 20,000 times the age of the universe to count to one mole Some atomic nuclei appear to spin and exhibit an angular momentum Examples: 1H, 2H, 13C, 15N, 19F, 29SI, 31P Because atomic nuclei are small elementary particles, the laws of classical physics do not apply. Instead the laws of quantum mechanics do In the laws of physics involving elementary particles Planck`s constant h = 2π ħ appears According to quantum mechanics an elementary particle with an angular momentum ħ I or spin I also possesses a magnetic dipole moment μ = γ ħ I A classical object with angular momentum is the spinning bicycle wheel A wheel spinning in a gravitational field formally follows the same laws as a spin in a magnetic field: it precesses around the direction of the field In NMR the precession frequency is called the Larmor frequency
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2. Basic Principles Niels Henrik David Bohr, 1885 – 1962. energy E = μz B0 Nobel prize in Physics 1922: ΔE = h ν (Wikimedia, ↓ μz = ħ γ / 2 public domain)
E1/2 Felix Bloch, 1905 – 1983. Nobel prize in Physics 1952: NMR. Scholar ↑ of Heisenberg (Wikimedia, CC BYSA 3.0)
ΔE = h ν0
μz = +ħ γ / 2
Quantum Mechanics
2π ν0 = γ B0
E+1/2
Edward Mills Purcell1912 – 1997. Nobel prize in Physics 1952: NMR (Wikimedia, public domain)
Properties of Nuclear Spins Following Heisenberg’s uncertainty principle, only the component of the spin in the direction of the magnetic field can be determined accurately From quantum mechanics it is known that a spin with the spin quantum number I can assume 2I + 1 stable orientations in a magnetic field The projection of the spin angular momentum along the direction of the magnetic field is proportional to the magnetic quantum number m, where m = I, I 1, ..., I I = ½ applies to the nuclei 1H, 13C, 15N, 19F, 31P, and I = 1 to 2H, 14N For nuclei with spin I = ½ there are two possible orientations of it’s projection along the axis of the magnetic field: ↑ (m = +1/2) and ↓ (m = 1/2) Both orientations differ in the interaction energy Em =  ħ γ m B0 of the nuclear magnetic dipoles with the magnetic field B0 According to Bohr’s formula ΔE = h ν0 the energy difference ΔE = E1/2 – E+1/2 = ħ γ B0 associated with both orientations corresponds to the frequency ω0 = 2π ν0 = γ B0 Here ν0 is the precession frequency of the nuclear spins in the magnetic field
2. Basic Principles
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Macroscopic Magnetization Macroscopic sample: 1023 nuclear spins
n/n+ = exp{ΔE/kBT}
Vector sum: macroscopic magnetization M
B ↑↓↓↑↑↓↓↓↑↓
zL
n+
↓↑↓↑↑↓↓↓↓↓ ↑↓↓↑↓↑↑↓↑↓ ↑↓↑↓↑↓↑↑↓↑
yL
↑↓↑↓↑↓↓↑↑↓
n
xL
Equivalent orientations of spins without thermal motion
Nuclear Magnetization in Thermodynamic Equilibrium At room temperature, all magnetic dipole moments change their orientations in the magnetic field rapidly, because the thermal energy kB T is orders of magnitude larger than the energy difference ΔE = h ν0 between spin states The average orientation of all spins in thermal motion is commonly mapped onto the orientations of cold spins not agitated by temperature and aligned either parallel or antiparallel to the direction of the magnetic field All (classical) magnetic dipole moments add as vectors. Their components in each space direction are additive The sum of transverse components vanishes The sum of longitudinal components forms the longitudinal magnetization This component is referred to as the magnetic polarization of the nuclei or the nuclear magnetization At room temperature only about 1018 spins of 1023 spins contribute the macroscopic nuclear magnetization of the sample In thermodynamic equilibrium, the nuclear magnetization is oriented parallel to the direction of the magnetic field By convention the direction of the magnetic field defines the z direction of the laboratory coordinate frame LCF with coordinates xL, yL, zL
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2. Basic Principles
Precession of Nuclear Magnetization Macroscopic nuclear magnetization
Spinning top in a gravitational field
⎥⎜zL
⎥⎜zL
precession frequency
Larmor frequency ω0 = 2π ν0 = γ B0
Bloch’s Equation When the magnetization M is not aligned with the field direction zL , it precesses around zL with the frequency ν0 in analogy with the precession of a top spinning with angular momentum L exposed to a gravitational force mg The precession is described by the equation for the magnetic spinning top: d dt M = γ M × B
This equation states that any change dM of the magnetization M is perpendicular to M and B; therefore M precesses around B In general any macroscopic precessional motion is attenuated. This is why Felix Bloch introduced phenomenological attenuation terms: 1/T2 0 0 0 1/T2 0 0 0 1/T1 The resultant equation is the Bloch equation, R=
d dt M = γ M × B – R (M – M0),
where M0: initial magnetization, T1: longitudinal relaxation time, and T2: transverse relaxation time, B: any magnetic field Note: The Bloch equation formulates a lefthanded rotation of the transverse magnetization. But for convenience sake a righthanded one is used in the illustrations in this book and much of the literature
2. Basic Principles
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Transverse Magnetization
Mxy(t) = Mxy(0) exp{(1/T2 + i ω0) t }
Fourier NMR
Laplace NMR
The legacy of Richard Ernst
The legacy of Paul Callaghan
2011
1987
Transverse Magnetization Bloch’s equation can be solved when spelling it out for the magnetization components with the thermodynamic equilibrium magnetization M0, dMxL/dt = γ (MyL BzL – MzL ByL) – MxL/T2 dMyL/dt = γ (MzL BxL – MxL BzL) – MyL/T2 dMzL/dt = γ (MxL ByL – MyL BxL) – (MzL – M0)/T1 In the laboratory coordinate frame, the magnetic field vector is B = (BxL, ByL, BzL)† = (2B1cosωTXt, 0, B0)†, where ωTX is the transmitter frequency Writing the transverse magnetization in complex form as Mxy = MxL + iMyL, for B1 = 0 the evolution of the transverse magnetization follows the equation dMxy /dt =  i γ Mxy B0 – Mxy /T2 With ω0 = γ B0, the solution provides the free induction decay (FID) in the laboratory frame, describing an attenuated lefthanded rotation, Mxy(t) = Mxy(0) exp{(1/T2 + i ω0)t } = Mxy(0) exp{t/T2 } exp{i ω0t } This FID can be generated with an rf excitation impulse. Therefore it is also known as the NMR impulse response The FID is the product of a decaying and an oscillating exponential function In real matter many decay rates 1/T2 and oscillation frequencies ω0 arise Distributions of frequencies are retrieved from Mxy(t) by Fourier transformation. Distributions of relaxation rates are retrieved from ⏐Mxy(t)⏐ by algorithms reminiscent of the inverse Laplace transformation
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2. Basic Principles
Magnetic Fields in an Oscillator Circuit
$
$
' $' *' ?@
$
$
!"# $ $
!"#!"# $
Contacting Nuclear Magnetization Nuclear magnetization can be rotated away from the direction zL of the magnetic field B0, which keeps the spins aligned, by a magnetic field B1 perpendicular to B0 oscillating in resonance with the precession frequency This field B1 oscillates in the radiofrequency (rf) regime with frequency ωTX and is generated by a transmitter TX For maximum interaction of the rotating field with the nuclear magnetization both frequencies need to match, defining the resonance condition ωTX = ω0 Radiofrequency electromagnetic waves are produced by currents oscillating in electronic circuits and are emitted from transmission antennas An electric oscillator consists of a coil with inductance L, a capacitor with capacitance C, and a resistor with resistance R The coil generates a linearly polarized, oscillating magnetic field 2B1 cos(ωTXt) Two orthogonal, linearly polarized waves cos(ωTXt) and sin(ωTXt) generate a rotating wave The linearly polarized wave 2 cos(ωTX t) of the coil can be decomposed into a right rotating wave exp{iωTXt } and a left rotating wave exp{iωTXt }, one of which can be adjusted to resonate with the precessing magnetization For optimum use of the oscillating magnetic field, the sample to be investigated is placed inside the coil of the electronic oscillator
2. Basic Principles
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Coordinate Transformation Laboratory frame (LCF) with coordinates xL, yL, zL: The dog looks at the bicycle riders 
Rotating frame (RCF) with coordinates x, y, z: The red bicycle rider looks at the dog
TX
zL z y

0t
= 
TX
xL
TX

x
TX
yL
TX
Rotating Coordinate Frame Transformations from one coordinate frame into another change the point of view, i. e. they change the mathematics but not the physics As the precession of nuclear magnetization is a rotational motion and the rf excitation is a rotating wave, the magnetization is conveniently studied in a rotating coordinate frame (RCF) with coordinates x, y, z The dog at the traffic circle is positioned in the laboratory coordinate frame (LCF) with coordinates xL, yL, zL: For the dog the bicycles are moving in the traffic circle with angular velocities ωTX and ωTX+ Ω0 The cyclists on the bicycles are viewing the world from the RCF. They are at rest in their respective RCFs For the red cyclist the world in the LCF is rotating against the direction of his bicycle with angular velocity ωTX For the red cyclist the yellow bicycle moves away with angular velocity Ω0 The connecting vectors from the center of the traffic circle to the bicycles correspond to the magnetization vectors in the transverse xy plane The angular velocity of the RCF as seen in the LCF corresponds to the frequency ωTX of the rf wave The spectrometer hardware assures that the NMR signal is measured in the RCF
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2. Basic Principles
Action of rf Pulses Laboratory coordinate frame (LCF)
Rotating coordinate frame (RCF) rf field B1 is off: M appears static
t M precesses around B0
rf field B1 is on: cesses M precesses d B1 around
90° pulse: ω1 tp = π/2 180° pulse: ω1 tp = π
RadioFrequency Pulses Radiofrequency (rf) pulses produce a magnetic field B1, which oscillates with frequency ωTX In the rotating coordinate frame RCF, which rotates on resonance with the precession frequency ωTX = ω0 = γ B0 around the zL axis, the magnetization M appears at rest even if it is not parallel to the magnetic field B0 When the magnetization is not rotating, there is no torque on the magnetization, so that in the RCF rotating on resonance with ωTX = ω0 the magnetic field B0 vanishes When the transmitter generates a B1 field rotating at the frequency ωTX of the RCF in the LCF, this field appears static in the RCF In the RCF the magnetization rotates around the B1 field with frequency ω1 = γ B1 in analogy to the rotation with frequency ω0 = γ B0 around the B0 field in the LCF If B1 is turned on in a pulsed fashion for a time tp, a 90° pulse is defined for ω1 tp = π/2 and a 180° pulse for ω1 tp = π The phase ϕTX of the rotating rf field B1exp{iωTXt + i ϕTX} defines the direction of the B1 field in the xy plane of the RCF Using this phase the magnetization can be rotated in the RCF around different axes, e. g. 90°y denotes a positive 90° rotation around the y axis of the RCF and 180°x a positive 180° rotation around the x axis
2. Basic Principles
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Spectrometer Hardware transmitter TX
computer for signal timing, data acquisition, & data processing
detection field B0
rf field B1 receiver RX
modulator for the magnetic field gradient G
NMR Spectrometer The sample is positioned in a magnetic field B0 inside or next to an rf coil, which is part of an rf oscillator tuned to the frequency ωTX The oscillator is connected under computer control either to the rf transmitter (TX) or to the receiver (RX) A 90º rf pulse from the transmitter rotates the magnetization from the zL direction of the B0 field into the transverse plane Following the pulse, the transverse magnetization components precess around the zL axis of the LCF with frequency ω0 According to the dynamo principle, the precessing magnetization induces a voltage in the coil, which oscillates at frequency ω0 In the receiver, this signal is mixed with a reference wave at frequency ωTX, and the audio signal at the difference frequency is acquired for further analysis This step is the transition into the rotating coordinate frame Depending on the phase ϕRX = 0° and 90° of the reference wave cos(ωTXt+ϕRX) the components cos(ω0ωTX)t and sin(ω0ωTX)t of the transverse magnetization are measured in the RCF at frequency Ω0 = ω0  ωTX Usually the inphase and the quadrature component are measured together For imaging and flow measurements the spectrometer is equipped with switchable gradient fields in xL, yL, and zL directions of the LCF
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2. Basic Principles
Fourier NMR
1
Pulsed Excitation Outside a magnetic field the magnetic dipole moments of the nuclear spins are oriented in random directions in space In a magnetic field B0, the nuclear spins partially align with the field and form the longitudinal magnetization M0 parallel to B0 in a characteristic time T1 following the rate equation Mz(t) = M0 (1  exp{t/T1}) T1 is the longitudinal relaxation time A resonant 90° rf pulse from the transmitter rotates the magnetization from the z direction of the magnetic field B0 into the transverse plane of the RCF After the pulse the transverse magnetization components Mxy,i precess around the z axis of the RCF with the difference frequencies Ω0i = ω0i  ωTX Each component Mxy,i corresponds to a different chemical shift or another position in the sample with a different magnetic field at the site of the nuclei The vector sum of the transverse magnetization components decays with the time constant T2* due to destructive interference of the components with different precession frequencies Ω0i T2* is the apparent transverse relaxation time. It is determined by timeinvariant and timedependent local magnetic fields at the sites of the spins The signaldecay envelope is often exponential: Mxy(t) = Mz(0) exp{t/T2*} The signal induced in the coil after an excitation pulse is the FID For one component it is Mxy(t) = Mz(0) exp{(1/T2* + iΩ0)t} after a 90° pulse A frequency analysis of the FID by Fourier transformation produces the NMR spectrum with a linewidth ΔΩ = 1/(πT2*)
2. Basic Principles
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Frequency Analysis
Jean Baptiste Joseph Fourier 1768  1830
ti time
(http://web.mit. edu/2.51/www/ fourier.jpg: public domain)
Fourier transformation Fourie
Free induction decay (FID): Time t
Fourier transformation
Spectrum: Frequency Ω
Fourier Transformation J.B.J. Fourier introduced the transformation named after him when studying thermal conductivity The Fourier transformation (FT) is a decomposition of a function s(t) into harmonic waves exp{i Ωt} = cos(Ωt ) + i sin(Ωt ) with variable frequency Ω In NMR the FID s(t) is transformed to the spectrum S(Ω) of cosine and sine waves: S(Ω) = ∫s(t) exp{+iΩt } dt The spectrum S(Ω) = U(Ω) + i V(Ω) consists of a real part U(Ω) and an imaginary part V(Ω) Often only the magnitude spectrum S(Ω) = [U(Ω)2 + V(Ω)2]1/2 is considered The Fourier transformation corresponds to the transformation of an acoustic signal into the pitch and volume of sound For the discrete Fourier transformation there is a fast algorithm, which was rediscovered in 1965 by J. W. Cooley and J. W. Tukey The algorithm requires discrete representations of time t = n Δt and frequency Ω = n ΔΩ at intervals Δt and ΔΩ, whereby range and step size are related via the acquisition time nmax Δt of the NMR signal following ΔΩ = 1/(nmax Δt) The abscissa of the discrete spectrum corresponds to the keys of a piano The spectral amplitude corresponds to the volume of a given tone NMR spectroscopy and imaging with pulsed excitation rely on the Fourier transformation for data processing. They are referred to as Fourier NMR The product of two Fourier conjugated variables, e.g. t and Ω, is always an angle. It is referred to as phase ϕ
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2. Basic Principles
ϕ0 = 45.9°
s(t)
s(t)
ϕ0 = 0
t
FT
U(Ω)
t
Phase Correction U(Ω) ≠ A(Ω)
U(Ω)
FT
U(Ω) = A(Ω)
Ω V(Ω)
V(Ω) ≠ D(Ω)
Ω V(Ω)
Ω
V(Ω) = D(Ω) Ω
Signal Processing Depending on the electronics of the receiver, the NMR signal s(t) = s(0) exp{[1/T2 + iΩ0] t + i ϕ0} of a magnetization component is recorded in practice with a phase offset ϕ0 For ϕ0 = 0 the real part U(Ω) of the Fourier transform S(Ω) is an absorption signal A(Ω) and the imaginary part V(Ω) a dispersion signal D(Ω) For ϕ0 ≠ 0 the real and imaginary components of S(Ω) are mixed in U(Ω) and V(Ω), and the associated complex spectrum S(Ω) = U(Ω) + i V(Ω) = [A(Ω) + i D(Ω)] exp{i ϕ0} has to be corrected in phase by multiplication with exp{i ϕ0} The correction phase ϕ0 consists of a frequencydependent and a frequencyindependent part The frequencyindependent part can be adjusted by software before data acquisition via the receiver reference phase ϕRX The frequency dependent part is determined by the time the signal takes to pass through the spectrometer and by the receiver deadtime following an excitation pulse For optimum resolution the spectrum is needed in pure absorptive mode as A(Ω) A frequencydependent phase correction of the spectrum is a routine data processing step in highresolution NMR spectroscopy
2. Basic Principles
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RF Excitation and Effective Field
Nonselective excitation: short pulse
1
Frequency distribution of the pulse excitation: B1(Ω) = B1(0) sinc{Ωt} = B1(0) sin{Ωt} / (Ωt)
1a
Selective excitation: long sinc pulse
Effective field in the rotating coordinate frame
1
Frequency distribution of the pulse excitation B1(Ω)
Frequency Distributions The rotating coordinate frame RCF rotates with the rf frequency ωTX Magnetization components Mi rotate in the RCF with frequencies Ω0i = ω0iωTX To contact magnetization components in a range of frequencies Ω0i with an rf pulse at frequency ωTX, the pulse has to have a frequency bandwidth This frequency range is approximated by the inverse of the pulse width tp A better measure for the bandwidth of the excitation is the Fourier transform of the excitation pulse For a rectangular pulse this is the sinc function with wiggles right and left Vice versa, the excitation can be made sharply frequency selective by excitation with an rf pulse having a sinc shape in the time domain This simple Fourier relationship is a convenient approximation valid only for flip angles smaller than 30º For a given component the offset frequency Ω0 corresponds to a magnetic offset field Boff = Ω0/γ along the z axis of the RCF The magnetization always rotates around the effective field Beff, which is the vector sum of the offset field and the rf field with components Ω0/γ and B1 The rotation angle around the effective field is given by γ Beff tp = ωeff tp The rotation axis is close to the xy plane if B1 >> Ω0/γ If B1